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iHMP? or something else?
it'd be nice if it had a specific set of genome(s)... could do the hu et al one
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sample:
https://www.ncbi.nlm.nih.gov/sra/SRR8315735
kallisto result:
![image](https://user-images.githubusercontent.com/3069871/219325395-4fc16c91-4d2d-423f-90dc-f6f3ce4aef62.png)
cellranger r…
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Hi @tpq, thank you for the wonderful CoDa methods you have implemented in propr! I read [Microbiome Datasets Are Compositional: And This Is Not Optional](https://www.frontiersin.org/articles/10.3389/f…
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In selection of other probes, there remains the issue of how to deal with data in expanding the number of mediation events detected. Ideally, I'd be using one nice LV method to reduce data down to 1 d…
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Hi!
The current method for MultiAssayExperiments requires some manual work which the end user may not be familiar with. As in [this example](https://microbiome.github.io/OMA/multi-assay-analyses.ht…
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## patch-seq assay
Label: patch-seq assay
Alternative term(s): patch clamp and RNA sequencing assay
Definition: A single-cell RNA sequencing assay that takes a patch clamp recording from a cell a…
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Due in FY25 Q1, in order to accomplish this work should start in FY24 Q4.
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Interop Contact:
Active in 2021: Active
**Researchers**: Xihong Lin (Harvard T.H. Chan School of Public Health)
## Analysis Question:
Large-scale Whole Genome Sequencing (WGS) studies and biobanks h…
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This ticket keeps track of existing eQTL fine mapping methods -- please use new comment for additional references so that I can be notified to add here and to my mendeley:
1. Davis, Joe R., et al.…
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Hello!
I would like to know whether GLUE has an implementation to perform query mapping of unlabeled data. I want to create a reference map with GLUE and be able later on to either map new data on…