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Hi,
I have some questions when using these scripts.
1. What are the functions of bootstrap in snpgenie_within_group.pl and SNPGenie_sliding_windows.R respectively, why do they need to be performed…
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Based on this discussion: https://github.com/HGVSnomenclature/hgvs-nomenclature/discussions/49.
As the r. coordinate type refers to mature (coding) RNA molecules, descriptions using the r. coordina…
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We decided to start with two schemas: a minimal schema that we would post now as what we should implement, and then an extended schema, which is in evaluation stage to see if it should end up in the m…
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### Prerequisites
- [x] make sure you're are using the latest version by `seqkit version`
- [x] read the [usage](http://bioinf.shenwei.me/seqkit/usage/)
### Describe your issue
* [x] describ…
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Hello,
Thanks for developing such great tools!
I am wondering if there is a way to apply tcr-dist on cdr3 amino acid sequences.
Currently, the instructions say it is required "nucleotide sequ…
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region argument in plot_arcs_compare does not behave as expected. This argument still displays the entire sequence x-axis but only plots interactions that begin prior to the region cutoff. Even if the…
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Hello,
Thanks for creating this tool! I've used it previously with RNA002 sequences, and the m6A output data used to reach the 3' end of my reads, however, with the RNA004 data, it now stops about …
esh97 updated
3 months ago
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Hi，
I have tested other methods like vadr and virulign to annotate viral contigs, But they failed to annotate viral contigs that have low nucleotide consistency with reference sequences. So, Can gb2s…
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Hi,
I am trying to run PrePH software on some sequences I extract using genomic coordinates and bedtools's getfasta. I am able to predict panhandles on most sequences but when I have to deal with l…
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**Steps to Reproduce**
1. Switch to Macro - Sequence mode
2. Load from file (unzip first) : [Possible to drop selection.zip](https://github.com/epam/ketcher/files/14929441/Possible.to.drop.selecti…