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Hi, Tanya. Can you please prepare a table that lists…
+ [x] the number of GitHub watchers, stars, and forks for each formula in Homebrew/science that has a GitHub a repo https://github.com/Linuxbre…
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Hi Brent,
I am annotating SVs using vcfanno and receive an error
`panic: intervals out of order within file: starts at: 4294967295 and 0 from source: 0` (full error below).
Given that 4294967295…
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Hi,
I ran into the following issue when attempting to run mity report 1.0.0. I was able to successfully run mity calling with
```console
$singularity exec -B /cluster --cleanenv docker://drmjc/m…
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Hi all, thanks for the wonderful library!
Unfortunately I think I've found a bug. Files compressed with `bgzip` (block gzip) are failing when trying to use `pako` to do streaming decompression.
…
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Dear Edoardo,
I want to use GREEN-VARAN workflow to prioritize variants.
I tried to GREEN-VARAN work flow on test vcf file "GRCh38.test.smallvars.tmp.vcf.gz".
/home/moon9319/nextflow /ho…
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Hello...
I used gemini and vcf2db previously with great successful, but I'm having issues when using a new set of VCFs I've just received..
I annotated with snpeff in the my usual way but receiv…
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I'd like to request a release of Linux ARM64/Aarch64 binary in addition to the Linux x86_64 and Mac OSX Intel ones.
Since few months Bioconda officially supports `linux-aarch64`.
Currently the rec…
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### Description of the bug
Encountered an issue during annotation related to AnnotSV. From what I understand it is a known bug for 64bit machines and is caused by Tcl and the allocated memory block l…
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### Description of the bug
For some reason it can't find the vep cache. I had something similar a while back and then used a custom config to fix this. I'm testing it helps now as well, if so we bett…
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Dear Edoardo,
I have been attempting to run the Nextflow workflow on a VCF file (and on the test file provided within the package), however regardless of version of nextflow (I have used both v20.1…