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Dear pioneers for much improved pathogen detection,
we have an example from nanopore (resulting in long reads > 1500 bps) where the kraken1-part of krakenuniq counts over 12000 kmers (k = 31) for a…
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I am trying to index the rat genome (Ensembl release 89) using the "make_rnor6_tran.sh" script in the hisat2 installation folder (this script includes known transcript structure in the index) on a wor…
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I am trying to assemble four relatively small bam files and getting a segmentation fault: 11 error. I can assemble two of them but the other two give this error. The last few lines of the -v output …
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SPEKcheck was developed with chart.js version 2.X. The latest chart.js version is 3.X and 4.X seems to be close to release (considering they have a migration guide for version 4). These major releases…
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Hi, I applied and ran the code successfully, but the result is not quite right, the loss does not drop, can you help me to see where is the problem. Thanks!
I ran the code by bash run.sh
Here is…
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Controllers and hardware can take hardware either by name (that setup on the box) or by a specific instance (or that from config), it would be convenient to be able to treat these effectively the same…
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Previously, our team was not able to successfully output a gene count matrix from Stringtie. I was able to run Stringtie on Andromeda and output a gene count matrix but many of the rownames are design…
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I have now found two pages where Website agent fails to get content:
- Docker hub tags page
- Steam community news page
What I've noticed is that both pages are using React and content is loaded …
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What would be some industrial applications of connectomics? Would we be able to eventually develop mind reading? Lie detection? Or possibly identifying regions of target for electromagnetic stimulatio…
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Add [spacemarkers](https://github.com/atuldeshpande/SpaceMarkers/tree/main/R) to the pipeline to be able to identify spatially interacting genes.
- [x] add `jhu-spatial` submodule from https://gith…