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Hi,
First of all, we want to thank you for this wonderful application. It has streamlined our variant annotation workflow tremendously.
We submitted the HG19 chr16-11349332-CC-TT variant to Ope…
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**Steps to reproduce:**
1. Open the Colab example from the README.
2. Run the provided script.
3. Observe the `FileNotFoundError` due to the missing `example_seqs.fasta` file.
**Request:**
Co…
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Dear TIES developers,
I would like to setup some FEP simulations for a protein-peptide system where I mutate a residue of the peptide. This seems similar to TIES-PM (https://doi.org/10.1021/acs.jct…
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Hi authors, I think the proteinBert benchmark data folder misses the train CSV for phophositePTMs (https://github.com/nadavbra/protein_bert/tree/master/protein_benchmarks). Can you help check this? Th…
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I am trying to link a registered sample (protein) as an (optional) attribute (called protein_id) in a sample (genetic part) that I extract from a datafile.
**Behavior1**
If I leave the registered s…
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Hi,
I wonder what configuration and object looked like for these objects? https://cells.ucsc.edu/?ds=multimodal-pbmc+sct
We have a gene expression + CITE-seq data for several objects, and we'd lik…
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# 15 Open source & Free Web-based 3D Molecular & Protein Modelling software
[https://medevel.com/15-3d-molecular-protein-modelling/](https://medevel.com/15-3d-molecular-protein-modelling/)
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@Chris-Evelo @egonw ;
Since several hormones/polypeptides are in the border region of being called a metabolite or a protein, we could think about including protein IDs for these types of compounds…
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Hi,
Thank you for developing NeuralPlexer. We ran our first attempts on a very challenging protein and we obtained promising results, most of all very different from the (useless) ones obtained wit…
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Farmer's Delight:
Tomato seeds = Beta Carotene + Cellulose
Rice = Glucose
Onion Seeds = Cellulose + Sulfur
Someone help me with cabbage please
AE2:
Certus Quartz = Germanium + Sillicon + Yttrium…