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When running tests using pglite, i'm getting this error many times:
```
bun test v1.1.29 (6d43b366)
index.test.ts:
# Unhandled error between tests
-------------------------------
1 | impor…
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Is it possible to use the latest version of the eggNOG database, version 5.0.2, with SqueezeMeta? It looks like the current used version is 4.5 (https://github.com/jtamames/SqueezeMeta/issues/372#issu…
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## Expected Behavior
FASTA and GFF output from easy-predict.
## Current Behavior
When running easy-predict, I get the following notification:
```
Could not open /groups/diamond/projects/animal/…
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### What type of bug is this?
Other
### What subsystems and features are affected?
Other
### What happened?
Hey, I am from Prisma, the popular Node.js ORM. We have [some users that want…
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Hi there!
Since VIAN is, at least theoretically, able to work with **large image databases,** I was trying to figure out the best workflow for this task. As you know, in order to work with the ima…
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Dear @torognes,
Using the sintax xlassifier I noticed that the algorithm in case of multiple identical best hits only outputs the first hit irrespective of the hits after that. This may results in…
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Hello,
I compiled bevel with Clang (v 703.0.31) on OS X. I tried to use parameter `-d` to specify a name of database to write and I got segmentation fault.
```
$bevel -d Tge_ref_db Tge_ref_filt…
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In your manuscript entitled "Triqler for Protein Summarization of Data from Data-Independent Acquisition Mass Spectrometry" you state that:
"The pipeline generated decoys for FDR calculations, whic…
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Hi
I ran the following scripts and get the error in alignment.
python3 scripts/precompute_alignments.py data/pdb_mmcif/mmcif_files/ data/alignment/ \
--uniref90_database_path data…
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Hello,
I got the error message during round 2 generating `FastaDB::_getFastaRecords: Could not locate lastSeqID=gi|5Query_574! at /my_path/RepeatModeler-2.0.2a/RepeatUtil.pm line 309.` when I runne…