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Dear developers, I have been using your software since version 2 and want to point out some potential loss of functionality. Please understand that this feedback is not meant to be critical but to ale…
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### Week 1 - Get to know the community
- [X] Join the communication channels
- [X] Open a GitHub issue (this one!)
- [x] Install the Ersilia Model Hub and test the simplest model
- [x] Write a motiva…
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I'm using STAR 2.7.2b and have been aligning SRA study SRP166889. Unlike others I've done it seems like the reads from this study cause STAR to have a very slow 2nd pass. Take for example from the s…
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**Submitting author:** @jjmccollum (Joey McCollum)
**Repository:** https://github.com/jjmccollum/teiphy
**Branch with paper.md** (empty if default branch):
**Version:** v0.1.3
**Editor:** @majensen
*…
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Hi,
I thought the issue with installing the echoverse could be, at least partly, due to my local environment
I tried to install echoverse within MAGMA docker container.
This did not improve #100 …
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Hello,
So I used biscuit to index successfully, but when I moved on to alignment I kept running into the issue shown below.
**Screenshots**
Attached is part of the alignment output I got, whic…
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**Submitting author:** @arendsee (Zebulun Arendsee)
**Repository:** https://github.com/flu-crew/smot
**Branch with paper.md** (empty if default branch):
**Version:** v1.0.0
**Editor:** @Bisaloo
**Rev…
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# Creative, Collaborative, and Quality Culture | APCSP
Fun in software engineering is when Project Teams have a collaborative culture. My favorite projects inside a company have been when the divisio…
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Dear,
I am working on an 18S sequencing project. For that I have to analyze my data and I have no programming skills. I am interested in the MetONTIIME workflow, do you have a demonstration of the …
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I am using Cutadapt 3.4 with Python 3.8.6
CogentAP pipeline uses Cutadapt for trimming. I did not install Cutadapt explicitly since it is already installed in the HPC. I just load the module to use i…