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This is a broad issue that I'll use to document some of the problems that have come up when scaling out the UKB pipeline.
For convenience, here is a list of issues that have been filed as a result …
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### What We Are Doing: Adding Timestamps to Videos
Adding timestamps to the description section of the videos on [Data Umbrella YouTube channel](https://www.youtube.com/c/DataUmbrella).
### Why W…
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Dear Mikko,
First, thank you very much for the matrixpls package, As you mention in your papers, the sample size determination and statistical power analysis is overlooked along many publications i…
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Our decision not to persist features limits the flexibility and reproducibility of the system. Triage is designed for batch processing, which means that we _could_ follow [functional data engineering …
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Is there a way to extract cells that are co-expressing my genes of interest ? How can I make a UMAP plot showing these cells similar to the single gene UMAP plots ?
Thanks.
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Hi @ZunsongHu,
I was testing the MD-ALL shiny app using the multiple sample mode combining the MEF2D and PAX5 alt sample given. It failed.
Running the samples in the single sample mode works fine.…
dade7 updated
1 month ago
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Dear professor,
Great software!
I have an issue about the results about the hybrid.
Here is the situation of my tests. I use there species of A, B, C and D with their species tree is (((A,B),C),D)…
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Hi developers,
Hope you are doing great! I have tried the methscan workflow and got the VMR_matrix folder, but found it challenging to do imputation and clustering for large-scale data, just wonder…
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Hi,
In "ENphylo model predictions and mapping.R", when i run the line:
```
enfa_test
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Some EA ethnicities had NA in all motifs in the raw dataset (`raw/folklore/data/Replication_Data_Folklore/Original_Files/Motifs_EA_groups.dta`). I fixed them using the following algorithm:
1. For …