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Hello,
Great pipeline!
I am trying TrEMOLO with drosophila genome assemblies and ONT long reads.
The pipeline works fine until this point:
```
[Thu Mar 16 19:54:30 2023]
rule GET_READS_TE:
…
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专项追踪
- [ ] 各个分支的跃迁演化
- [ ] FL.2.3.1 + S:Q14R `A21603G, G29543T`
- [ ] EG.5.1.1 with S:P681R
- [ ] S:403K
- 等待更新......
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- [ ] GT call update to include ./. or -/-.
- [ ] AF/VF addition
- [x] Tags which variant callers called and what are their filters
It would be nice to get input from both @hassanfa and @bjhall o…
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example: I would like to make a peppy.Project from a sample yaml file:
```
- sample_name: sample 1
file: path/to/file.tsv
- sample_name: sample 2
file: path/to/2.tsv
```
…
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I have imported into GenomicDB and am using 3200 intervals to paralelise across hg38 but most intervals don't finish within four hours. It worked decently for ten to fifteen samples but not now that I…
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I am working on a small rare diseases clinical diagnostics research project with human WGS (Cardiff, UK)
We've already run the snakemake pipeline (minus Hifasm assembly) for one trio family with two …
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The user Dan Bolser reported a strange behavior for this variant:
https://www.ebi.ac.uk/gwas/variants/rs11385942
EMAIL TEXT BELOW:
On this page:
https://www.ebi.ac.uk/gwas/variants/rs11385942
you s…
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Hi, is there some Python interface for GenomicsDB?
Hoeze updated
10 months ago
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Hello,
I tested the T7 model on WGS data using DV1.6, but I keep getting the following error message. I generated the test data using the T7 platform for sequencing. Could you please tell me what wen…
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Please add the results of the following commands:
git status
```
On branch develop
Your branch is up to date with 'origin/develop'.
Changes not staged for commit:
(use "git add ..." to upd…