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We should have a DP to document has-part to CL. This would primarily be a documentative DP as it would not have an equivalence axiom.
We would document anti-patterns. The primary antipattern is mak…
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https://github.com/microbiomedata/issues/discussions/835
Criteria for completion
- Determine NMDC policy for env_local_scale
- Determine NMDC policy/ method for env_local_scale in SOIL
- Draft ADR fo…
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This came up in [a PR](https://github.com/microbiomedata/nmdc-runtime/actions/runs/10604019109/job/29389664401?pr=657) where Patrick was working on updating ETL code.
there are errors about associate…
aclum updated
2 weeks ago
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As [discussed here](https://github.com/mapping-commons/sssom/discussions/250) JSKOS is another format also used to encode mappings. The format is defined on JSON. In practice newline delimited JSON wi…
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**Describe the bug**
PyCharm raises an IDE error from the plugin:
```
Caused by: The following command was executed:
/Users/jonny/git/p2p-ld/nwb-linkml/.venv/bin/ruff --exit-zero --no-cache --…
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1. What is the definition of _Proband_? Should we use a different term?
2. What should we do about families with 2 affected children (ie. 2 Probands)
I have been using the NCIT definition [here](h…
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**Is your feature request related to a problem? Please describe.**
The best practices for modelling sets of things in Biolink remains somewhat undefined or, at best, heterogeneously defined.
**…
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### Session description
A large variety of schema languages exist, defined inside or outside of W3C; to name a few: [RDF-Schema], [OWL], [SHACL], [ShEx], [XML-Schema], [JSON-Schema]... Each of thes…
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@kevinschaper reports that kg-phenio may be missing edge categories.
- [x] Check if edge categories are present in the KGX output.
- [ ] If not, investigate the transform and the PHENIO build.
- …