-
Ask Arlin for contact information. Here is what she writes:
"One use simple small case I can think of is for comparison of agricultural or model species. For example, my colleagues and I published …
arlin updated
7 years ago
-
We utilize a fair amount of punning to simplify our data model and use existing ontologies as CVs for describing our data. The most common example of this is punning gene class IRIs in linking to th…
-
Hello, I am trying to perform gene-based testing on UKB data (following the tutorial found here: https://dnanexus.gitbook.io/uk-biobank-rap/science-corner/using-regenie-to-generate-variant-masks), but…
-
We need a new annotation "cardinal feature" that would drive which of the possible multihierarchies to assert.
For instance, for Marfan, the primary parent would be 'genetic syndromic disease' and i…
-
I didn't do these (it's another 55!) would need to do all the singles, create the doubles and then do the phenotypes. This one can wait for the spreadsheet format...
The session is already quite unwi…
-
Expected Behavior
--------------------------------------------------------------------------
For Bugs:
---------
### Environment
#### Steps to Reproduce
-
in my data set we are doing some comparisons of multiple time points. When writing the needed comparisons in the config file we have multiple rho comparisons we need to do.
After the run is done w…
-
Notes from Google Doc with @smvelasquez
(MV) As I went along I realized that I could add new metagenotypes from scratch or add new phenotypes to an existing metagenotype
(AC 21/03/22) Yes, and it …
-
## Background
There was an issue where a lot of ChEMBL evidence were marked as duplicate.
A solution was implemented similar to what was done for the ClinVar evidence. The granularity was aggreg…
-
Added one table so far with unique codings for sex and race.
Column (variable) names also unique
The table so far search_cloud.cshcodeathon.organoid_profiling_pc_subject_phenotypes_gru
Aiming for…