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New terms for human IgG immunologlobulin complexes (part of the HIPC-CL collaboration)
These are pretty straight forward, similar to existing terms for IgA and IgD, except I have added a bit of com…
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I'm seeing a difference between mikado-2.0rc4 and mikado-2.0rc6_* versions in relation to calling and exclusion of transcripts with retained introns.
I'm attaching a screenshot of this region http:…
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Sorry if this is not the right place to ask!
Question:
Would it be desirable/possible to have a separate package with only the TH machinery for generating boilerplate? (+ general-purpose stuff lik…
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Dear `dplyr` developers,
[A recent Stack Overflow question](https://stackoverflow.com/questions/51428156/dplyr-mutate-transmute-drop-only-the-columns-used-in-the-formula) raised an interesting use …
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/yuhuihui2011/vasp
Confirm the following by editin…
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We have a bunch of packages (30+, see list below) that are currently failing on all platforms in release and devel with the following error:
```
! Undefined control sequence.
l.53 \bioctitle
…
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**Error: need finite 'ylim' values**
I get this error when trying to plot the mean-variance trend. What does it mean?
Also when trying to run limma it gives me this warning and error:
Warning in…
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Hi!
I'm finding tools to analyse intron retention events in my RNA-seq data, but I'm confused if the alternative splicing events detected by leafcutter include this. Could you please explain for me…
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Dear Eduardo,
I have a question about psiPerEvent function. After using generateEvent function from GTF file to obain SE SS MX RI FL, 5 ioe files, should I use these ioe files as input into psiPerEve…
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It seems the Chimeric.out.junction file from STAR chimeric alignment would output the internal junction information. We could use that information to analysis the internal splicing pattern of circRNAs…