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wyguo
/
ThreeDRNAseq
A pipeline for differential expression and differential alternative splicing analysis
https://github.com/wyguo/ThreeDRNAseq
GNU General Public License v3.0
60
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[Bug] [help wanted]
#48
AlessandraLongo
opened
5 months ago
0
run3DApp() [Bug]
#47
v55555555555555555555555555555555
opened
6 months ago
1
DOI link for all references etc
#46
peterjc
opened
10 months ago
0
My quant file directory is apperently too big
#45
tensulin
closed
11 months ago
0
"Low.expression.filter" function not found
#44
MrGoebel
opened
1 year ago
1
ThreeDRNAseq R package?
#43
naychikhin
opened
1 year ago
0
[Help] error with time series analysis
#42
Shukla04
opened
1 year ago
0
Errors with file names [Help]
#41
kathrynmk
opened
1 year ago
6
[Help]
#40
aru1593
opened
1 year ago
0
PCA and data normalisation [Bug]
#39
HendrikWS
opened
1 year ago
0
[Bug] Data normalisation
#38
HCherif2022
opened
1 year ago
0
[Help]
#37
aru1593
opened
1 year ago
0
[Help]
#36
aru1593
opened
1 year ago
0
[Enhancement]
#35
aru1593
opened
1 year ago
3
Time serie in wrong order[Help]
#34
bourbous
opened
1 year ago
11
[Help] Duplicated biological replicate for Controls
#33
RxLoutre
closed
2 years ago
1
[Question] Count table after normalization
#32
RxLoutre
closed
2 years ago
2
[Help] Loading the experimental design file
#31
RxLoutre
closed
2 years ago
2
Warning: Error in isTRUE: object 'lang' not found
#30
huang-sh
closed
3 years ago
2
Description
#29
canankolakoglu
opened
3 years ago
1
Trying to Replicate the 3D Code in R: Disparities
#28
danphillips28
closed
3 years ago
4
Cannot load csv or gtf only .fasta[Help]
#27
jason2389
opened
3 years ago
1
[Help]
#26
realextract
opened
3 years ago
3
[Help] Easiest Way to Pull Out Both Condition Expression and PSI for Custom Figures?
#25
danphillips28
closed
3 years ago
2
[Help]
#24
amitpande74
opened
4 years ago
0
running 3DRNAseq at gene level
#23
Shukla04
opened
4 years ago
2
Typo fixed on line 296
#22
kant
closed
3 years ago
0
Hangs on Time-series trend analysis [Bug]
#21
apn83
opened
4 years ago
3
Error
#20
amitpande74
opened
4 years ago
1
Custom GO annotation loading [Enhancement]
#19
apn83
opened
4 years ago
0
Option to load last session [Help]
#18
apn83
opened
4 years ago
1
[Bug] error while generating expression
#17
FloresKneil
opened
4 years ago
1
[Bug] Unable to install locally
#16
apn83
opened
4 years ago
8
Error while running the app
#15
amitpande74
opened
4 years ago
1
[Help]
#14
sk1350
closed
4 years ago
4
[Enhancement] 3D output.zip needless nested folders
#13
peterjc
opened
4 years ago
0
[Bug] PDF report missing, just LaTeX file
#12
peterjc
opened
4 years ago
0
[Enhancement] No response on "Plot all significant isoform switches"
#11
peterjc
opened
4 years ago
0
[Enhancement] Isoform plot does not strip whitespace
#10
peterjc
opened
4 years ago
0
[Enhancement] Disable "View saved plot" until it has been saved
#9
peterjc
opened
4 years ago
0
[Bug] Misleading icon - round mouth, cross for eyes face
#8
peterjc
opened
4 years ago
0
[Bug] Step label misleading for batch effect removal
#7
peterjc
opened
4 years ago
0
[Enhancement] UI unclear once an upload finishes
#6
peterjc
opened
4 years ago
0
[Enhancement] Contrast group editing
#5
PeterVenhuizen
opened
4 years ago
0
[Enhancement] Save location selection
#4
PeterVenhuizen
opened
4 years ago
0
[Bug] 3D App crashes when running Isoform switch analysis
#3
PeterVenhuizen
opened
4 years ago
1
[Bug] quant.genes.sf auto-selection
#2
PeterVenhuizen
closed
10 months ago
4
[Help]
#1
amrsc23
opened
4 years ago
1