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**Context**
When working with meta"omics" data, it could be possible to separate the host reads if a reference is available.
![image](https://user-images.githubusercontent.com/59807620/10359487…
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Hi,
I have used zUMIs process a lot of datasets, it works pretty well. Thanks for your nice job!!
I meet a bug after trim reads by Trimmomatic.
`samtools view: writing to standard output failed…
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Hi,
When I run the teflon analysis with command
>python3 mcclintock.py \
> -r /work/mcclintock/test/sacCer2.fasta \
> -c /work/mcclintock/test/sac_cer_TE_seqs.fasta \
> -g /work/mcclint…
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Hi @jradrion
I try your pipeline in one human sample (coverage 40x), but for some reason the genotype folder is empty and all the files in countPos/ are empty too.
**_Follow my commands:_**
…
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Hi,
How are you? I hope this email finds you well!
I've been trying to run this tool to predict plasmids in e. coli, but I've seen to have run into a problem. It seems to be some kind of problem wit…
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it fails at
Started at Sat Jan 2 13:12:09 2021
Terminated at Sat Jan 2 13:12:15 2021
Results reported at Sat Jan 2 13:12:15 2021
Exited with exit code 1.
Resource usage summary:
…
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Hi,
I always get the error at the end of the bam_alignment_qc run. The bam file is sorted and I removed all secondary alignments using "samtools view -F 256 input.bam > output.bam", because I wasn'…
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I have been trying to run my uce data through phyluce tutorial II, but have encountered an issue. The final output ```joined_allele_sequences_all_samples.fasta``` is empty, and only contains headers i…
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**Command used:**
$ nanoplot -t 4 --fastq ./demultiplex_nc_qcat_NBD104_adaptrim_porechop_16_11_2020/barcode01_ad_trm.fastq -o ./nanoplot
**Problem:**
Nanoplot reports html file is not containing on…
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Hi,
I am doing RDDs with JACUSA (working great !)
* My test statistics scores range form 0.001 - 300.
Is this score meaningful when working **without** replicates?
What would be a descent/accept…
u9090 updated
3 years ago