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Hi, I saw this package some week ago in the Fortran-lang discourse. It rose a lot of interest in my group, as we have widespread needs for well written optimization packages. Now we are starting to ex…
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[Apptainer/Singularity](https://apptainer.org/) is a container system aimed for HPC clusters. It would be great to create and maintain our own Apptainer image so we can guarantee reproducible environm…
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Actual issue explained in the next comment.
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FYI, instead of:
https://github.com/Bioconductor/BiocParallel/blob/c1b26bc64e114d3453c9ebb5ec4ea95e80cf2f4b/R/SnowParam-class.R#L65
you can use [`parallelly::freeConnections()`](https://parallel…
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(I'm starting to work on #openjournals/joss-reviews/issues/5409.)
I'm trying to install the code on a vanilla linux machine without using root access to install system wide package because I think …
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Support of [Environment Modules](https://modules.sourceforge.net/) in the dev env section.
### Description
Environment modules allow to load a shell configuration (generally for enabling some so…
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### Description of feature
We are standardizing our cluster to 8c/64gb so `base.conf` should reflect that
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ipyrad version 0.5.15, pairgbs mode.
Step 6 fails with the following:
Step 6: Clustering at 0.95 similarity across 72 samples
[####################] 100% concat/shuffle input | 0:01:42
[####…
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On our attempt to render many images simultaneously with mitsuba on an HPC system, Dr.Jit crashes if multiple renderings are scheduled to run on the same compute node:
```
Critical Dr.Jit compiler…
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Hi,
Using a nextflow pipeline (developed in 22.10.6), I want to run ~4000 jobs; these jobs each can take 1-2 days depending on the coverage. I intend to run this workflow on the Linux clusters of …