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I am running kilosort2 on a 32 channel recording, with widely spaced electrodes. I am running into an issue where waveforms are not aligned in time within the sampling window, so they are oversplit an…
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I'm trying to sort Open ephys recorded sessions using ms5 in spikeinterface. To do so I used both the ".continuous" files and the mda files, but in various sessions I obtained "strange" results". In p…
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Line 210 and 277 in template.py are triggering errors on my machine, since the last push of zarr handling for Templates. The error is:
TypeError: unsupported operand type(s) for |: 'type' and 'type…
yger updated
9 months ago
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Hi @DradeAW @alejoe91
I would like to be able to smooth or low-pass filter a recording. Bandpass recording with near-0 freq_min doesn't work in my case because I don't want to normalize across dis…
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My data is collected by Intan in RHD data, which is then converted into raw files and stored using spikeinterface. I subsequently read this raw files again and gain LFP data through filtering. Howeve…
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Hello,
I have been using mountainsort5 for spike sorting and phy to curate and inspect the units. After I have further curated the units in phy, I wanted to get the unit IDs, excluding those marked…
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It would be useful to have the option 'with_recording' also in the method 'select_units' for the waveformextractor.
On top of adding the parameter to [L766](https://github.com/SpikeInterface/spike…
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Thank you for this spike sorter! Do you support the .ns5 file format that is used by Blackrock and Ripple neural data acquisition systems? Alternatively, is there an easy way to convert these files in…
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Our data is collected by Intan devices in RHD format, which is then converted into raw files and stored using spikeinterface. We then read the raw files again and obtain MUA (Multi-Unit Activity) thro…
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There's some cases where it's better to interrupt a recording but still to cluster/sort the segments like a single recording. For example when using multiple paradigms or sleep. Since recordings can g…