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Hello Cromwell Team,
Our bioinformatics team have been reporting a single retry after preemptible attempts have been exhausted. They've added logic in the task itself that introspects the vm in th…
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Hi,
I'm a grad student attempting to use telogator with my long-read nanopore sequencing data, thanks in advance for your help. I'm fairly new to any kind of bioinformatic work.
Is the python s…
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Create a docker file based on the install requirements found on [install38.md ](https://github.com/KCCG/ClinSV/blob/master/INSTALL_b38.md).
So far here are some of the dependencies involved:
- per…
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**Submitting author:** @sadit (Eric S. Tellez)
**Repository:** https://github.com/sadit/SimilaritySearch.jl
**Branch with paper.md** (empty if default branch): joss
**Version:** v0.9.3
**Editor:** @jb…
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I'm running a project which requires contrasting samples in both the 'group' and 'gender' columns in the metafile. The scripts are flexible in accepting the 'gender' column instead of 'group' in most …
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The instillation instructions section on how to run the configuration is possibly out of date and confusing. I saw that it was last updated in October 2021 but version 3.0.0 came out in Feb. 2022 per…
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https://mp.weixin.qq.com/s/PXJ4hyzqoth1nDUWKc028g
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For sequences previously designated B.1.1.7 but not passing the scorpio threshold, ref calls were more often in deletions. Would be good to be able to update the definitions to have more flexibility s…
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It would be nice that the pipeline was also capable of running with singularity and conda, instead of only docker, which would be more similar to what is found in [nf-core modules](https://github.com/…
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BA.2 sequences with additional mutation S:A27P (nuc G21641A) have appeared mostly in Washington State, USA with the first sequence 2022-02-07 and the most recent sequence from 2022-03-23. On Cov-Spe…