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Hi !
I get the following error :
`ValueError(invalid literal for int() with base 10: '1*\nCAGCT[···]` in build_clusters for Step 3.
The error is raised in line 486 of clustes_within.py :
`i…
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New map focused HS.
Assumptions: This portion of the redesign completely replaces the current HS and Explore Nearby.
Zeplin link - https://zpl.io/blmRKOP
Requirements:
- [x] Map is …
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LSHForest should be deprecated and scheduled for removal in 0.21. It should also warn about having bad performance. cc @ogrisel
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instructions in https://github.com/threefoldtech/jumpscaleX/blob/development/docs/flist/auto_generation.md are very wrong, DO NOT USE
we need to use language = DSL for specifiying how to sandbox/bu…
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Hi All,
I realize this is more of a chimera problem than a dada2 problem, though the dada2 approach results in many more sequences to check for chimeras than traditional clustering approaches. I am…
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Hello, I've started exploring this lib and have a feature request:
Provide reduce function(s) to clustering configuration, so it's possible to filter clusters by aggregated properties rather than just…
vibze updated
5 years ago
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I am trying to use your algorithm to do clustering, but I am getting a few weird issues. First, the package keeps trying to load SC3 and its dependencies while running (with particular note made of `p…
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This discussion bring some insights about adding a multivariate imputer in scikit-learn. Because of release time constraint, the development was moved into a specific branch (FIXME: give a specific na…
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#### I'm trying to do following to assemble a diatom:
(1) Kneaddata/Trimmomatic for my transcript reads;
(2) Mapping the reads to my unmasked genomes;
(3) Using RNA-Spades for the transcript as…
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Hi,
When I gonna to filter out cells, I found one of the option in "creatseuratobject" is "min.genes". But I don't know how to determine this value. Anyone can help me? Thx.
Bests,
Na
xnaer updated
5 years ago