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BLAST options error: File /home/teacher/CasLocusAnno/temp/NC_003071.7-2chr.fasta.neighbor is empty
Traceback (most recent call last):
File "CasLocusAnno.py", line 558, in
File "CasLocusAnno.py…
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**Submitting author:** @lucaspompeun (Lucas Neves)
**Repository:** https://github.com/lucaspompeun/airbase
**Version:** v1.0.0
**Editor:** Pending
**Reviewer:** Pending
**Author instructions**
Thank…
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Hi Jon,
I'm trying to follow the steps you outline in https://github.com/nextgenusfs/gene2product/issues/2.
The need-curating.txt file after my annotation run has output like this (mostly eggNOG…
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Hello,
I am running Canu in a High Performance Computing cluster.
I used Canu for a bacterial genome assembly (draft) successfully.
I am trying to assemble another genome, but the job has failed…
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Hello,
In a given biosample on NCBI, there appear to be many runs and experiments associated with any SRA.
I am interested in one organism within a larger Biosample which had it's transcriptome …
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(old internal ticket 9)
**(note: keep this overview up-to-date by editing this issue, and mention new promo-actions as a reply)**
Promote EasyBuild on suitable venues:
### conferences/magazines:
- […
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write comments in applicable configuration file and write documentation on how to enable as-needed submission to NIHMS bulk submission FTP site via configuration changes
URL to send bulk submissio…
htpvu updated
5 years ago
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I've been taking a look at the annotation sets that we currently import into the GOA database and that have been identified as being unmaintained, namely those from JCVI/TIGR and PAMGO_Mgrisea.
I'v…
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Currently using funannotate v1.6.0-ad5c0de as I had to re-run one sample prior to NCBI submission.
When I can my sample through I was getting and MIBiG error where the program wasn't finding the c…
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At the scale testing F2F we observed some very long running workflows that were A) getting stuck running a particular task, and then getting B) pre-empted and taking even longer to run. We noticed thi…