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**Thank you so much for your help regarding the installation.
I'm preparing for Bulkrnaseq by referring to
https://bcbio-nextgen.readthedocs.io/en/latest/contents/bulk_rnaseq.html
But in the l…
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Great to see this project. I would like it so multiple plates can be processed in parallel.
The output will be a single count matrix or SingleCellExperiment object
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https://mp.weixin.qq.com/s/-ol394h5QaruwuJzhGVjQA
ixxmu updated
2 years ago
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https://mp.weixin.qq.com/s/yr-bAnlnKPCJegsLsJWWpg
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Can you please direct me to the code used to generate pseudobulk rna-seq from the paper and how to run the pam50 subtyping on the pseudobulk?
I see the bulk-rna seq pam50 code but want to apply the p…
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# 生信爱好者周刊（第 45 期）：
这里记录每周值得分享的生信相关内容，周日发布。
本杂志开源（GitHub: [[ShixiangWang/weekly](https://github.com/ShixiangWang/weekly/issues/%5Bhttps://github.com/ShixiangWang/weekly)]([https://github.com/Shix…
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Hi,
I have a dataset with about 100 samples and each cell type contains around 10-20 samples, can I make it as a reference dataset and project a single cell RNA dataset onto it?
Thank you!
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https://mp.weixin.qq.com/s/OQ-XlXOo3ZUJh4CXu6h8Og
ixxmu updated
2 years ago
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Hi! I have checked codes in _ENIGMA_v1.2.tar.gz_, and I found some codes are different with the former [codes](https://github.com/WWXkenmo/ENIGMA/tree/main/R). For example, **batch_correct()** in _ENI…
Ci-TJ updated
2 years ago
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Hi,
I have a dataset from GSE123814 and I'm trying to re-analyze them using CellO. I normalize the data using the typical approach in your tutorial, and finish `cello.scanpy_cello()` without error. H…