-
### Description of bug
I have a yaml file like this:
```
module_order:
- cutadapt
- trimmomatic
- fastqc:
name: "FastQC (final BAM)"
anchor: "fastqc_bam"
info: "this is my i…
-
Hi Vini,
any clue what's this error?
This is the log file:
Memory value 8 MB was outside the allowed range (100 - 10000) at /home/fricci/rp24/fra/software/miniconda3/envs/metaphor/lib/python3…
-
1. Build Workflows
- RNA-seq quantification
- RNA-seq variant calling
- ChIP-seq
2. Associated Datasets/Training Data
3. Interactive Tours based on content
4. Share with GTN/GOBLET
5. Galaxy …
cschu updated
8 years ago
-
### Description of the bug
I'm trying to process bulk [Smart3-seq data](https://teichlab.github.io/scg_lib_structs/methods_html/SMART-seq_family.html#SMART-seq3) using the pipeline (related Slack d…
-
Hi! I am following your GUAVA manual and using the sample data. But my analysis cannot finish, I see this error code always.
Adapter trimming...Done
fastq QC...
Alignment...
Please wait while b…
-
I'm trying to run the haplotypers on the Silverback cluster on the HIV data and am getting errors when running aBayesQR and regresshaplo (and savage but the problems with that are already known).
…
-
### Description of the bug
The 'nextflow run systemsgenetics/gemmaker -profile test,singularity' test run is broken. Did they chage the data access URL at NCBI again?
### Command used and termina…
-
This issue is to kick off a discussion of strategy around documentation content, with an eye toward issue #43, implementing documentation of workflows in sphinx.
There are a number of different ver…
-
Not sure what was going on with this one before, maybe @csawye01 or @drpatelh can shed some light here.
-
Hi,
I'm using STAR to do an RNAseq analysis on Staphylococcus aureus sRNA.
The aligment is working, but during the maping I have this Fatal error:
Transcriptome.cpp:18:Transcriptome: exiting b…
Mpvrd updated
3 weeks ago