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I think this would be a useful feature as `--usearch_global` only aligns a small percent of my reads because I haven't truncated the database to just the region that we sequenced.
We sequence using n…
audy updated
10 years ago
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There are quite a few errors hit when running the tests on OS X:
```
.................E...EEEE....E..........E.....EEEEEEE..............................E........................estscan not available …
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Not sure if already known... I did not see a similar issue so I just write it up for the next release ;)
- Affymetrix - log in required - is that intended, shall we keep that?
- Agilent, Illumina …
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Hi,
@pb-jlandolin
I download some test data from the ncbi, as the sra-tools do not provide a "pacbio-dump" like fastq-dump or illumina-dump, I used the commod "fastq-dump --table SEQUENCE *.sra" . But…
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I got error message"EXITING because of FATAL ERROR in reads input: short read sequence line: 0
Read Name=@HWI-D00289:135:C4U3VACXX:3:2316:6629:26242
Read Sequence====
DEF_readNameLengthMax=50000
D…
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- [ ] Web site has statement of number of users/developers/members.
- [ ] Web site has success stories.
- [ ] Web site has quotes from satisfied users.
- [ ] Web site has list of important partners or…
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```
What steps will reproduce the problem?
1. Download the attached queryname-sorted bam file
2. bamToBed -i test.bam -bedpe > out.bed
*****ERROR: -bedpe requires BAM to be sorted/grouped by query nam…
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Dear masurca developpers, dear all
First of all, thank you very much for developing this very nice suite, very usefull for the community :)
I encounter a very long lag time of more that 15 days at t…
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Hello,
I have been working with the package and it works like a charm with the default datasets included in the package (K4, K9, world 9 and so on). However, I have found that the results do not ma…
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Ripropongo nuovamente il problema segnalato già all'uscita del gioco: la musica di sottofondo è completamente assente. Nonostante abbia scaricato ed installato le due patch incrementali e settato il v…