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**Submitting author:** @wsmets (Wenke Smets)
**Repository:** https://github.com/LebeerLab/tidytacos
**Branch with paper.md** (empty if default branch): master
**Version:** v0.3.0
**Editor:** @diazrena…
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- N1: Create fully normalised database with tables
### Information overview taken from requirements.md
#### User
- Username: text
- Password hash: text
#### Observation
- Plant species: te…
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Beginning with sequence-based searches of the literature via PaperBLAST and using the sequences acquired from PomBase, UniProtKB
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This issue is for discussion about planning our weekly meetings and themes.
The format of the meetings will likely evolve, however some structure will help keep the meetings on track and on schedu…
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e.g. the query
```SPARQL
SELECT DISTINCT ?item ?itemLabel ?_PubMed_ID
WHERE
{
?item wdt:P31 wd:Q13442814 ;
rdfs:label ?itemLabel .
OPTIONAL { ?item wdt:P698 ?_PubMed_ID. }
FIL…
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Hello,
I've been trying to use wgd V2 to calculate a Ks peak
I've taken a subset of my CDS (~3K sequences)
When I run
```
wgd dmd subset.fasta
```
I get:
![Screenshot 2024-06-25 at…
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An error occurred when running the sif file. --annotate 1 --plant 1 --intact_anno 1
```
2024-07-24 20:57:48,357 - main.py[line:316] - INFO:
--------------------------------------------------------…
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Implement predation as per gadget2: https://gadget-framework.github.io/gadget2/userguide/chap-stock.html#sec:stockpredator
### Examples of gadget2 models to integration-test against
* @vbartolin…
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Dear all,
I am afraid it is an off-topic question, but I failed to find any other documentation on phylolm elsewhere.
Suppose you fit a phylogenetic logistic regression to your binary data (pre…
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TG meeting 2022-03-02, action point: Vertebrata group, upload recommended classification to ChecklistBank.
2022-03-09, ZOOM meeting with @NicBailly.
Final version: COL_Vertebrata_Classification_…