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Among the mappings to CALOHA that you are providing, could you please check the three following ones :
1) late embryo UBERON:0000323 fetus TS-0360
-> there is no def for the UBERON term so…
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Currently, the EQ for abnormal pancreas weight MP:0009107 uses:
'has part' some
('abnormal body weight' and ('inheres in' some pancreas) and ('has modifier' some abnormal))
Change to:
'ha…
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# Bug: Notebook Editor, Interactive Window, Editor cells
## Steps to cause the bug to occur
1. Accidentally deleted multiple cells by double clicking the garbage can icon in the top right co…
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Hi, I wonder if I could do analysis for cell cell communication between distant organs? A related issue might be #53
Specifically, I think I would reduce the ligand-receptor database to only secre…
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### Device information
* Dexcom G6
* Palm Phone PVG100
* Android 8.1
* xDrip+ Nightly 49817a5-2021.10.04
### Is your feature request related to a problem? Please describe.
My 6-year-old child …
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no more `annoy` dependency, `pynndescent` is also default for umap, and it performs much better
https://github.com/lmcinnes/pynndescent
![image](https://user-images.githubusercontent.com/2588748…
giovp updated
3 years ago
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/JEFworks-Lab/veloviz
Confirm the following by edi…
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This issue was first reported by @edeutsch in [RTX issue 1699](https://github.com/RTXteam/RTX/issues/1699).
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I ran some of the cellrank examples following cellrank's documentation but can't compute schur vectors and schur matrix.
import cellrank as cr
adata = cr.datasets.pancreas_preprocessed("../example…
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Hi Dr Bergen,
I got splicing rate (β) through scv.tl.velocity(adata,mode='dynamical').
I found some β values were more than 1 and the most β values were less than 1 and more than 0.
And I foun…