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JG.3.2+C25046T(S:P1162S)
GISAID query: A22910G,C25046T,C7086T
No. of seqs: 44(USA 3 Mexico 1 Canada 40)
First: EPI_ISL_18611936, Mexico, 2023-10-10
Latest: EPI_ISL_18710614, Canada, 2023-12-20…
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There seems to be a large branch of JN.1.32+S:Q183H now.
However, it can also be JN.1.9+S:T572I. Same problem for JN.1.16.1
Part of JN.1.9.1 is placed under this branch, shall call @AngieHinrich…
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It seems that there's another BA.2.86+S:V1104L branch likely emerged in SE Asia, with S:L455S it effectively reproduces the current fastest spike of JN.1.11.
BA.2.86.1+G24872T(S:V1104L)
GISAID q…
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Hello Dr. Usher,
I want to test if the rendering result realistic enough and this process need image output to compare.
So how can i save the result as image format (like ppm).
Thanks
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Allow and else clause on for and while loops that executes if the loop never executes.
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XBB.1.16.24--HK.3
Breakpoint between 13628 and 14855
![image](https://github.com/sars-cov-2-variants/lineage-proposals/assets/10445944/c6573853-5dda-4a29-800d-4bdc678820ad)
Additional mutatio…
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First spotted by @ryhisner
XBB.1.16+
T422C, T3771C, G11609A, T14460C, T15993C, T16380C, A18135G, G18443A, A19459G, G21956C, A24696G, T24796C, G24954A, G25352A, A25905G, A27617T, G28839A, A28993…
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Hi Freyja Team,
Is it intentional that when using the `--depthcutoff` parameter, the `-like` lineages are all grouped within the `Other` summarized? For example, if I disable the cutoff (`--depthcu…
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### **Description** Transferred from https://github.com/sars-cov-2-variants/lineage-proposals/issues/1594
**Sub-lineage of:** KP.2.3 (= JN.1 + S:∆S31, S:H146Q, S:R346T, F456L, V1104L + ORF3a:K67N + O…
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From https://github.com/sars-cov-2-variants/lineage-proposals/issues/467
This was originally proposed in #2058 however as usher tree structure change #2058 now refers to its parent called XBB.1.16.…