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When rerunning vcfQC using the protocol data, qc_1
following error occurs:
```
hs3163@node101:/mnt/vast/hpc/csg/xqtl_workflow_testing/finalizing$ singularity exec containers/bioinfo.sif /bin/bas…
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I used this bit of Python code to systematically identify pairs of irreversible transport reactions oriented in opposite directions, and I think most of them should be combined into single reversible …
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- Describe the issue or question:
Good day, I am running a LFQ workflow using .mzML files and the mouse ref database. I get this error and unfortunately not any of the previous issue's answers seem r…
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GitHub actions triggers two system tests when I push a commit to PR - one due to commit action and the other due to PR activity. For some reason, one of them goes to completion while the other gets ca…
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您好，我是用的singularity建的image，顺利建成了sif文件。
`singularity build dnbc4tools.sif docker://lishuangshuang3/dnbc4tools
....
INFO: Creating SIF file...
INFO: Build complete: dnbc4tools.sif`
然后我测试了一下m…
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--Hi,
i used AnnotSV and knotAnnotSV (last version from github) with:
$ANNOTSV/bin/AnnotSV -SVinputFile my_AnnotSV.bed -outputFile ./my_annotated.tsv -svtBEDcol 4 -vcf 1
perl ./knotAnnotSV.pl -…
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Dear author,
I run a total of 24 samples which were sequenced and provided by the same company. 12 of them were successful while others failed in step 1. The system log wrote that error occurs when…
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### Description of bug
We use subsampled datasets for quick integration testing of our cellranger workflow -- for example 10,000 reads. It's not enough for meaningful analysis, but cellranger will p…
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## Balsamic features for the next release:
Balsamic v12
## Alignment
- [ ] #993 :
- [ ] Adapt the CLI to accept multiple reads and concatenate the fastqs
- [ ] Remove concatenation and …