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### Description of the bug
As you mention in your Nextflow pipeline: @https://nf-co.re/sarek/3.0.2/parameters it would be possible to obtain the results of tumor-only somatic variant calling using st…
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Hi,
I installed circlator from here (github) and after installing all the dependencies listed here I ran 'circlator progcheck' but this is the error I keep getting and I have tried a lot of things i…
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Hi,
I am new to bioinformatics and very new to kraken and bracken. I am working on it for one of my project and was able to get kraken report as an output so it seems as tho kraken2 is working on …
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Conda is slow. There is already an option to use mamba instead of conda for solving, but we should further investigate the following fixes:
* [ ] remove `defaults` channel, as bioconda and conda-fo…
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Hi,
thanks for releasing the `SciBERT` model and datasets :heart:
I'm currently integrating an importing method of the NER data into the [flair](https://github.com/zalandoresearch/flair) librar…
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Hi,
in module 3 lab exercise 2 when building enrichment map I always get error 'No genes in the expression file are found in the GMT file'. I'm following instructions in the lab manual and I cannot f…
ghost updated
7 years ago
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![image](https://user-images.githubusercontent.com/96686347/193448098-c0554a6e-0e7b-47cb-8efb-4f622b9e39ba.png)
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Saw that you created this repo, so I wanted to throw in a shameless plug for my new tool, [ViralMSA](https://github.com/niemasd/ViralMSA) 😄 It performs reference-guided MSA by wrapping around Minimap2…
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TBProfiler generates a resistance report that lists each drug on a separate row. This makes it a bit difficult to gather together resistance info from multiple samples. It would be convenient to have …