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I am fairly new with using scanpy, and so I may be performing this incorrectly. I encountered an error when trying to create a backed AnnData object from an h5ad file, and then logarithmizing the dat…
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### Project short name: Covid19BALFLandscape
### Primary Wrangler:
Arsenios
### Secondary Wrangler:
Ida
### Associated files
* Google Drive: [folder](https://drive.google.com/drive/folders/1Ua…
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I'm running a scATAC-seq analysis. The data was obtained from the published work: **Single-Cell Chromatin Accessibility Analysis Reveals the Epigenetic Basis and Signature Transcription Factors for th…
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Hello,
I would like to explore extending this tool for barcoded short reads. I think it would be reasonably straight forward to capture the barcode with a pattern and store it in the metadata of th…
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Display is optimized for phone/portrait layout.
If a display supports it should we display all pages?
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Hi,
Thanks for the awesome tool and package, I have a question regarding reading the `mtx` file format. According to the documentation from [https://broadinstitute.github.io/wot/file_formats/](http…
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# 1054. 距离相等的条形码
## 入选理由
暂无
## 题目地址
[https://leetcode-cn.com/problems/distant-barcodes/](https://leetcode-cn.com/problems/distant-barcodes/)
## 前置知识
- 堆
- 贪心
## …
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Hi,
I recently ran MiXCR v.4.7.0 with my 10X TCR data on multiple samples. Here is the exact command I used.
mixcr -Xmx100g analyze 10x-sc-xcr-vdj --threads 8 --species hsa sample1_R1_001.fastq.…
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Hi there,
Thanks for building this awesome (and very well documented) tool!
In working through the documentation I came across this part:
> The information contained in the posterior can be u…
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Hi,
I am trying to generate a .loom file out of 10X fastqs using the fromfq command. Everthing seems to run smoothly up to saving the loom file (everything prompted as expected, "INFO - Saving" inc…