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https://mp.weixin.qq.com/s/U_F6dfyK4oK8V4AWF9RQkQ
ixxmu updated
3 weeks ago
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Hello to all,
I have a question about salmon and more precisely the alignment part.
I use salmon on BAM files of RNAseq data and the problem is that I don't really know what to use as .
I used …
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Hi, I am trying out the `test_data` using `stereoRun_singleLane_v4.1.0.sh`. However, I failed to find the unspliced counts among the outputs. Do I need to modify `stereoRun_singleLane_v4.1.0.sh` to g…
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*This is for internal use only; if you'd like to open an issue or request a new feature, please open a bug or enhancement issue*
### Instructions
This document should be filled out prior to embark…
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Hi, Tanya. Can you please prepare a table that lists…
+ [x] the number of GitHub watchers, stars, and forks for each formula in Homebrew/science that has a GitHub a repo https://github.com/Linuxbre…
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Hello,
Thank you for developing this nice tool.
I have single-cell RNA sequencing (scRNA-seq) data from tissues generated by crossing two distinct mouse strains. I am aware of the single nucleotide …
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data look like are scaled twice and then the unscaled data are used for analysis? check and clarify here:
https://github.com/hputnam/Becker_E5/blob/master/RAnalysis/Scripts/RNA-seq/Host/Host_Dif…
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It would be great if Percolator PSM-level tab-delimited output files could be supported by FlashLFQ. I looked into this, and there are two major and several minor challenges associated with making th…
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Dear @ronammar,
I am very grateful for your tool. In particular, I was using the plotting function for analytics since I have some low-input (lower-quality) RNA-seq data and was comparing the densi…
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### Aims/objectives.
We currently have BID-seq, eTAM-seq, and GLORI, amounting to a total of 65 dataset. We need to add more data from the public domain, esp. if we aim for a publication. We cannot…