issues
search
STOmics
/
SAW
GNU General Public License v3.0
119
stars
32
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
metaclass conflict when running SAW_7.1.sif
#126
YiqianGu
opened
6 hours ago
1
Number of MMP reads exceeds the threshold
#125
reyvnth
opened
2 days ago
1
Can't pull the image because dockerhub has been close
#124
feeisnotfree
opened
3 days ago
1
Bad magic number in .pyc file
#123
aadimator
closed
3 days ago
1
pandas is incompatible with numpy < 1.20.3
#122
YiqianGu
closed
6 hours ago
3
fastq-SE segmentation error
#121
YiqianGu
closed
1 week ago
2
Multiomics analysis dotplot_RNA
#120
WeijiaSu
opened
2 weeks ago
1
errors in cell cluster for proteins
#119
WeijiaSu
closed
2 weeks ago
0
What does "cell bin" mean?
#118
Zhouchlei
opened
4 weeks ago
2
register issue
#117
Wooseok1114
opened
1 month ago
1
Fata error, sequence contains control characters
#116
iichelhadi
closed
1 month ago
2
OSError {Errno 30] related to write errcode.log during the step 03.register.
#115
wzhang42
opened
1 month ago
3
Test data "SS200000135TL_D1_v4_brain" does not have .ipr file ?
#114
Zhouchlei
closed
1 month ago
4
Test data "SS200000135TL_D1_v4_brain" does not have .ipr file ?
#113
Zhouchlei
closed
1 month ago
0
Did SAW 7.1 use stereopy to perform cell segmentation?
#112
yemao701
opened
1 month ago
3
error in report step v6.0
#111
niexiaoqing
opened
1 month ago
1
Ask for GEM file format description
#110
jphe
opened
1 month ago
1
Matrix representation problem
#109
X7xf
opened
1 month ago
1
subsamplig
#108
BioRB
opened
1 month ago
1
Question in mapping: [malloc(): memory corruption]
#107
yzhirui
opened
1 month ago
3
cannot download SAW from DockerHub
#106
ruiliphy
opened
1 month ago
1
Adding bin id tags to reads in bam file
#105
Ed2uiz
closed
1 month ago
5
04.register's errors ？？
#104
Boundless1
closed
1 month ago
2
Input for stereopy
#103
maximelepetit
closed
2 months ago
5
no <stainType>_SN_mask.tif file in 04.register directory
#102
niexiaoqing
closed
1 month ago
19
tissue.gef missing
#101
Guy2Horev
opened
2 months ago
3
ERROR IN register
#100
niexiaoqing
closed
1 month ago
2
cellCluster Failed
#99
myshu2017-03-14
closed
1 month ago
3
Incompatible matplotlib and numpy version in the .sif files
#98
MathurinD
opened
3 months ago
2
upgrade ipr and tar image
#97
DMaspero
closed
1 month ago
1
partially initialized module 'cv2' has no attribute 'gapi_wip_gst_GStreamerPipeline'
#96
tenlives
closed
4 months ago
6
Manual Registration part 2 failure
#95
raforsyth
opened
4 months ago
10
failed to register
#94
Sooooooooda
closed
1 month ago
1
singularity exec SAW_7.0.sif failed
#93
tenlives
closed
4 months ago
6
SAW-A40704 in Manual_part2
#92
JungTaeKim103
closed
4 months ago
2
Inquiry on Manual Registration Process
#91
JungTaeKim103
closed
4 months ago
3
Building genome index references are not correct
#90
gringer
closed
1 month ago
1
Script requires `bash`
#89
gringer
closed
1 month ago
1
Issues with Image Registration: How to Obtain Upstream Files Compatible with MOSTA from SAW Analysis
#88
LiTing99-cutie
closed
1 month ago
4
fault(genomic Parameter verification failed.) on Mapping
#87
ultraypy
closed
5 months ago
2
ERROR SAW-A40704
#86
JungTaeKim103
closed
5 months ago
6
stereo.core.StPipeline.find_marker_genes in multi-sample
#85
sparkumr
closed
5 months ago
2
report：KeyError: 'mapped_reads'
#84
hgl2017
closed
5 months ago
4
SAW-A40001: The version of 0.1.0 is too low to deliver automatic registration
#83
QAU-JackZhang
closed
5 months ago
6
SAW-A10300:genomic Parameter vertification failed
#82
RookieA1
closed
5 months ago
16
Segmentation fault(core dumped) on tissueCut
#81
OswaldZhang
closed
5 months ago
9
Manual Registration Part 2 Error
#80
raforsyth
closed
1 month ago
3
register KeyError: "Can't open attribute (can't locate attribute: 'WhichStitch')"
#79
iichelhadi
closed
7 months ago
2
Why can't I just use docker mount to run the command?
#78
RADIOMUMM
closed
1 month ago
5
SAW 7.0 - Can't generate genome index
#77
gringer
closed
7 months ago
1
Next