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ipyrad version 0.5.15, pairgbs mode.
Step 6 fails with the following:
Step 6: Clustering at 0.95 similarity across 72 samples
[####################] 100% concat/shuffle input | 0:01:42
[####…
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Hi,
Thank you for developing this!
I have been trying to give this a try on some of our data and I keep getting this error:
```
Unmatched Files in Folder:
Error Encountered:
Unhandled except…
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Dear lotus2 team,
I have 16S data that was already demultiplexed & cleaned (i.e., **no primer parts left**).
I created a basic sample map using lotus -create_map and then ran lotus2.
Running lo…
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**Description of bug:**
Tried to use multiqc on the fastqc files that was created from dragen automatically after demultiplexing. Not sure if that is supported.
**MultiQC Error log:**
`…
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See [**data-wrangling**](https://czi-sci.slack.com/archives/C024HCSH9PT/p1666655738788709).
@jahilton has documented one case for "pooled" :
> The only cases where we have no donor_id is when sa…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/michaelplynch/demuxSNP
Confirm the following by e…
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Hello,
sslh sounds like an excellent tool! I do however wonder a little about its impact on the connections it's proxying/demultiplexing.
- Is there a noticeable latency due to probing?
- Does …
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**[Dave Syer](https://jira.spring.io/secure/ViewProfile.jspa?name=david_syer)** opened **[AMQP-180](https://jira.spring.io/browse/AMQP-180?redirect=false)** and commented
Useful forum discussion: htt…
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Hey,
I'm trying to run Demuxafy.sif popscle ,
Firstly I try to do without filter as say in the tutorial of Demuxafy : https://demultiplexing-doublet-detecting-docs.readthedocs.io/en/latest/DataPre…
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Hi,
I am running the mop_preprocess workflow in a computer with an Apple M1 chip. I am getting an error related to it. Is there any way to circumvent it? The workflow is completed successfully when…