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Dear Sebastian and amica team,
Thanks again for all your work to make this useful tool publicly available.
I understand that the imputation is necessary for some of the features in amica, however t…
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@galaxyproject/training-proteomics
Notes for all tutorials in this topic (16.09.2019):
![index](https://user-images.githubusercontent.com/1842467/64973561-85f5da80-d8ab-11e9-9ae9-a566c8c36b55.p…
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Greetings @levitsky,
I am currently analysing open search results from proteomics files from PXD008443. I am consistently experience the error indicated below. Please do advise me on how to trouble…
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Currently, it is difficult to identify datasets with proteomics information that is not RPPA. There are several datasets, such as CCLE and TCGA pan-cancer ovarian/breast, that have CPTAC mass-spec pro…
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I am trying to validate an `LC-MS Top-Down` submission from Northwestern (for reference @jswelling has't not ingested this dataset nor @cebriggs7135 has not validated it using Airflow). When I use th…
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Hi Fragpipe,
Im trying to do a Philosopher Filter command on a large (3348 bruker files) dataset. Im using quit the powerful machine on this, but I run into an error that states im out of memory. S…
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### Abstract
Mass spectrometry (MS)-based single-cell proteomics (SCP) is an emerging field that requires a dedicated computational environment. `QFeatures` along with its extension `scp` allow for s…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/tidymass/masstools
Confirm the following by editi…
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**Describe the bug**
ProgressReportNumber in the Milestone Tracker is not showing milestones 3 and above for some studies.
**To Reproduce**
Steps to reproduce the behavior:
1. Go to projectLive-…