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https://genie-public-beta.cbioportal.org/study/summary?id=brca_akt1_genie_2019%2Claml_tcga_pan_can_atlas_2018%2Cacc_tcga_pan_can_atlas_2018%2Cblca_tcga_pan_can_atlas_2018%2Clgg_tcga_pan_can_atlas_2018…
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Currently not done in MetaCAT's biLSTM.
Might be difficult to do for clinical notes, see https://github.com/CogStack/MedCAT/discussions/85
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The current endpoint that we are developing takes as input a clinical note. This is useful, among other, to demonstrate the PHI Deidentifier as a user can send a clinical note and get its de identifie…
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I haven't really found an option to compare two independent (healthy controls vs. patients) correlation coefficients of MRI metrics (e.g. FA) with neuropsychological measures - i.e. does FA correlate …
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> Millions of human genomes and exomes have been sequenced, but their clinical applications remain limited due to the difficulty of distinguishing disease-causing mutations from benign genetic variati…
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Labels for the rows of the heatmap are only allowed to be a single letter in a circle. This is ok when the groups are in rows, since each group has a single letter label, but if you swap axes it resul…
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Review AURORA IRB to access to clinical data
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As a bioinformatician,
I want to be able to set the action in StatusDB, the ticket number, customer, pipeline and delivery type when downsampling a case,
So that new cases do not have to be manu…
fevac updated
1 month ago
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Integrating MIMIC-III (https://physionet.org/content/mimiciii/1.4/) or other EHR databases would be a great addition.
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**GOALS:** Create a pipeline that can be used to extend pediatric clinical-concept mappings to a new data source.
**Workflow Update:** @SteeleRobert has agreed to help with creating this pipeline.
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