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Just looking over one of the author submissions, WBPaper00054648 and saw that the pipeline didn't extract C. elegans as a species for this paper, although some version of 'elegans' is mentioned 58 tim…
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To make a logical definition for sperm motility in GO, we need to be able to include sperm from organisms such as C. elegans. However, CL has this:
male gamete and (capable of some flagellated sperm…
ukemi updated
4 years ago
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Hi,
where is ugene looking for the plasmid files? I don't see any. Please make this configurable in the Settings too. Users would hence laso know where they are stored.
![no_plugins](https://use…
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Hi Sergey,
I have a simulated data set that I'm using for assembler accuracy benchmarking, and Canu fails to build any unitigs from it. It's a sampling from C.elegans reference, with read lengths…
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When I select a species other than yeast from the menu or panel in GRNsight beta 4.0.17 and right-click on a gene to open the gene page, the Gene page says "Species not found" in the upper right-hand …
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The nopct file (CP000493_ad.nopct) was first loaded. Then the diagram button was clicked. Afterwards, the load files menu was reopened and the rest of the dot files for this sequence were loaded. E…
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The way we are fetching authors in https://github.com/libero/prc/commit/d3a654cbde839d93828704928282289d251ef47a through RDF does not maintain an order of the authors.
`curl -v -L -HAccept: applica…
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Provide a list of important species occurring within the proposed biosphere reserve, including common names, wherever possible
ref biosphere_reserve_nomination_form_2013_en.pdf
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Dear Maria,
We have genotyped many similar genotypes of C. elegans using PacBio sequencing (Mutation Accumulation lines diverged over 500 generations; ~200 SNPs worth of genetic distance between ea…
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In step 3, for gap annotations it states we should extract the files from UCSC's `chromAgp.tar.gz` into a folder, merge them and then grep for **component type U or N** (which is in column 5).
IMO…