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Dear open-cravat team,
Please add, **[GeneBe](https://genebe.net/)** plugin (ACMG score and classification) in **open-cravat**. VEP and MobiDetails added this plugin in their pipeline/analysis.
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I'm trying to use the `--acmg` flag but having the following issue
command is: `python3 tapes.py sort -i ./VCFs_teste/Sample.vep.vcf -o VCFs_teste/out_files/ --tab --acmg --by_gene -a hg19`
```
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It should be possible to automatically fill some of the fields on the ACMG classification form with data shown on the variant page. E.g. if a variant is of nonsense type, rare, predicted deleterious o…
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### Name and Institution (Required)
Name: James East
Institution: Harvard ACMG
### New IMI feature or discussion
Currently, IMI fails if `PointSourceDatasets` in the config file is blank. Th…
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New tab in the VCI to support table entry of v4 of ACMG.
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We have no way to prioritise variants within an analysis node. This would be good to reduce classification work on medical scientists.
ACMG classifications have 5 levels of clinical significance, but…
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### Name and Institution (Required)
Name: Lucas Estrada
Institution: Harvard ACMG
### Description of your issue or question
### Name and Institution (Required)
Name: Lucas Estrada
Institut…
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**Is your feature request related to a problem? Please describe.**
The selection options for the seqvar ACMG tool are not 100% compliant with most recent manuscripts.
**Describe the solution y…
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Clinical centers are recommended to check ACMG's incidental finding list (http://www.ncbi.nlm.nih.gov/clinvar/docs/acmg/). It would be useful if Gemini facilitated this kind of query by either buildin…
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高血压自动填充后ACMG条目那列变为ACMG等级,“致病性结论”那列标识为**“生信”**。如果ACMG条目那列为“**生信**”,说明没有找到对应ACMG条目。主附表凡是没匹配到已解读库的位点都会自动做判断。