ClinGen gene-and-variant-curation-tools issues

ClinGen / gene-and-variant-curation-tools

ClinGen's gene and variant curation interfaces (GCI & VCI). Developed by Stanford ClinGen team.

https://curation.clinicalgenome.org/

MIT License

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issues

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Update the logic and language for the GCI classification point cutoffs

#383 cgpreston opened 3 days ago
0
The VCI should not generate an ERepo link for non-EP groups

#382 cgpreston opened 1 month ago
4
Capture, prioritize, and specify v4 features not in v3

#381 cgpreston opened 2 months ago
0
Assess options for adding several new tools to the VCI

#380 cgpreston opened 2 months ago
0
Add Gene Curation SOP v11 as an option in the pull-down menu and make SOP v11 the Default by September 11th, 2024

#379 bmpbowen closed 2 months ago
4
Add GCI Paper to banner on curation.clinicalgenome.org landing site

#378 bmpbowen closed 2 months ago
3
Display more detail in the CSpec selection modal

#377 cgpreston opened 3 months ago
1
Support user/CSpec-driven gene name identification in the ERepo

#376 cgpreston opened 4 months ago
1
Display additional evidence on Curation Central landing page

#375 bmpbowen opened 5 months ago
0
Add alerts when same proband is mentioned in different PMIDs

#374 bmpbowen opened 5 months ago
0
Only display maternity/paternity confirmed when de novo = yes.

#373 bmpbowen opened 5 months ago
0
Alter GCI Curation Central section proportions

#372 bmpbowen opened 5 months ago
3
Update GCI Tooltips

#371 bmpbowen opened 5 months ago
0
dbNSFP list order is not maintained

#370 ibosdet closed 6 months ago
0
Fix styling for "Acknowledge Other Contributors" form in GCI Approval panel

#369 markmandell opened 6 months ago
0
ClinVar Primary Transcript fields missing in VCI

#368 cgpreston opened 6 months ago
0
Mockup ClinVar API user experience in the VCI

#367 cgpreston opened 6 months ago
0
Protein Interactions Feature Requests

#366 bmpbowen opened 6 months ago
3
Update strengths to certain criteria codes in the VCI

#365 cgpreston closed 3 months ago
2
Make Final Approval Date a Required Field

#364 wrightmw closed 6 months ago
2
Add ferret as a model organism in the GCI

#363 bmpbowen closed 7 months ago
2
Rename affiliation request 10103

#362 bmpbowen closed 7 months ago
1
GCI - limit reviewed/approval/published date to current and past date

#361 gcheung-SF closed 6 months ago
1
Piloting VCEP publishing workflow for CSpec and MONDO

#360 cgpreston opened 9 months ago
0
Update BRCA Exchange URLs

#359 cgpreston closed 8 months ago
1
Backfill CSpec versions in the VCI

#358 cgpreston opened 9 months ago
0
GCI: Score homozygous probands at 0.1.

#357 bmpbowen closed 8 months ago
4
VCI v4 infrastructure assessment and recommendations

#356 cgpreston opened 9 months ago
0
Auto-release approved records to the ERepo from the VCI

#355 cgpreston opened 9 months ago
1
REVEL data needs from LDH for the VCI

#354 cgpreston opened 9 months ago
2
Improve link to LOVD

#353 ifokkema opened 9 months ago
2
Affiliations service to GPM

#352 wrightmw opened 10 months ago
0
Flag any PMIDs in the GCI/VCI that are actually preprints

#351 bmpbowen opened 11 months ago
2
Update REVEL scores in VCI

#350 cgpreston opened 1 year ago
8
Investigate and update CiVIC link issue reported

#349 cgpreston closed 10 months ago
1
Issue with the REVEL score provided from myvariant.info

#348 cgpreston closed 1 year ago
24
2023 wipe of the test site

#347 cgpreston closed 10 months ago
2
Scoping adding gnomAD v4 FAF, GroupMax and read coverage to the VCI population tab

#346 cgpreston opened 1 year ago
0
Update the VCI gnomAD table from gnomAD v2.1.1 to v4.0.0 data

#345 cgpreston opened 1 year ago
4
update gnomAD link to variant local region

#344 cgpreston opened 1 year ago
2
Dashboard update requests

#343 cgpreston opened 1 year ago
4
Replication Over Time de-selection

#342 wrightmw opened 1 year ago
0
Update the GCI to the new HPO API by Nov 29th

#341 bmpbowen closed 1 month ago
3
Add Gene Curation SOP v10 as an option in the pull-down menu and make SOP v10 the Default by October 31st

#340 bmpbowen closed 2 months ago
2
Update publishing rights from the VCI to ERepo

#339 wrightmw closed 1 week ago
1
Add "Not Specified" checkbox to case-control fields in GCI

#338 bmpbowen opened 1 year ago
0
Colorize the Specification Document button in the VCI

#337 cgpreston closed 11 months ago
2
Assess the upcoming ClinVar changes and potential impact on the VCI

#336 cgpreston closed 8 months ago
2
Adding PubmedBookArticle to GCI

#335 wrightmw opened 1 year ago
0
Add link to VCEP standardized text in the help menu

#334 cgpreston closed 1 year ago
3