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Hi everyone,
I am actually working on model at agenome scale of a green algae Chlorella Vulgaris. And we read on the article that in heterotrophy, the organism cannot take the acetate as a carbon so…
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Hi,
I'm trying to run classify.seqs command on Silva LSU database. I obtained fasta file from SILVA web site.
Transform taxonomy to create taxonomy files. I tried to run the command on my data wit…
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We use a proxy for internet access and set environment variables http_proxy and https_proxy. That works for curl and httr to fetch data without any errors (e.g. `httr::GET('https://www.google.com')` r…
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Hi,
the `get_taxonids` function in `Bio::DB::Taxonomy` will sometimes return an incorrect uid (taxon ID) given a scientific binomen. This will happen if there is an initial "no hit" for the binomen (…