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* [Home · marbl/Krona Wiki](https://github.com/marbl/Krona/wiki)
* [cpauvert/psadd: PSADD -- PhyloSeq ADDitions](https://github.com/cpauvert/psadd)
* [plot_krona: Interactive Taxonomy plot with Kron…
bbest updated
6 years ago
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Following our discussion with @nekrut , I am creating an issue to outline essential components for creating a barebones HIV (or other short RNA virus) genomic analysis pipeline.
Key steps for ampl…
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Not fully clear of how and what but a suggestion below on how promoting R packages in population genetics, since it is probably one of the end-product of our working group (?):
A way to do is to pub…
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This issue contains monthly updates to an automatically ranked list of PubMed papers as candidates for curation in the Bioregistry. Papers may be relevant in at least three ways:
(1) as a new prefix…
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This issue contains monthly updates to the ranked list of PubMed papers for curation. The full list can be found [here](https://github.com/tanayshah2/bioregistry/blob/5560dcf284f2c0309287e0a5a551e435e…
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Submitting Author Name: Klaus Schliep
Submitting Author Github Handle: @KlausVigo
Other Package Authors Github handles: (comma separated, delete if none) @emmanuelparadis, @liamrevell,@darunabas…
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Draft content for block 2 of the workshop.
superset of issues #24, #25, #26.
Getting data from:
- list of Genbank IDs (@KatherineCaley todo)
- EnsemblLite (@GavinHuttley todo)
- Published…
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**Description**
**Sub-lineage of:** BA.2
**Earliest sequence:** 2023-7-24, Denmark
**Most recent sequence:** 2023-7-31; Denmark & Israel
**Countries circulating:** Denmark (2), Israel
**Number of…
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*************edited November 20***************
**TRACKER**
BA.2.86: -C6541T,A7842, C8293T, G8393A (new query thx to @aviczhl2 )
JN.1 QUERY: C18894T, T15756A, A7842, -C6541T
XDD Query : C6541T…
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**Submitting author:** @wrightaprilm (April Wright)
**Repository:** https://github.com/wrightaprilm/treesiftr
**Version:** v1.0.0
**Editor:** @juanklopper
**Reviewer:** @ethanwhite, @rachelss
**Archiv…