-
Dear espresso development team:
Greetings~
Allow me to describe to you the problem I'm having: when using the command ESPRESSO_C.pl, I'm running the code as follows:
perl /home/zhaojiaxin/anacond…
-
Hello,
I’ve been admiring the chromosome collinearity images produced by the ` jcvi.graphics.karyotype` module; they are indeed very beautiful. However, it seems that this module is designed prima…
-
I have briefly used Gradio before and could have an attempt at designing a frontend for the project. However, before starting, I wanted to discuss how much feature parity we could achieve with DeepMin…
-
Hi, to generate the Circos visualization for fish mitochondrial DNA, you have to manually update the annotation file. Is it possible to use the annotations from the MitoFish annotator?
https://gith…
-
## 🐛 Bug
It seems that at some point, when choosing to follow the `zyx` "row-major" ordering, we also assumed a left-handed coordinate system. This goes against expectations and often results is mi…
-
TL;DR - there are uniprot KW and EC annotations to this family that contradict the literature.
I'll take yeast RAD26 as an exemplar here, but similar patterns are seen in orthologs.
Uniprot has …
-
-
## *Repository Creation Request for Bioinformatics and Computational Biology*
1. #### Coordinating Institute: Amrita Vishwa Vidyapeetham
2. #### Approver’s Name: Dr. Shyam Diwakar
3. #### …
-
## *Lab/Experiment(s) Hosting Request*
1. **Hosting Unit**:
| Conversion of sequence from one database format to another using file format converter | [Experiment repository URL](https://virtual-…
-
The Neo4j browser can be used for some visualization. There are grass files providing formatting optimized for specific displays.
Other tools are being developed. These generally require our java c…