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Hi there! Im new using this tool, so sorry in advance if I'm asking something silly.
I'm trying to use the `read_analysis.py` script for metagenome analysis, but I'm encountering issues with the ge…
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Thank you for providing this tool! I am curious if there is an established cutoff or threshold for determining similarity during analysis. Specifically, have you tested how well the tool can discrimin…
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### Description of the bug
Hello !
I hope you all are having a good day !
I was encountering an issue where the img2pdf command in the CONVERT_WISECONDORX_IMAGES. I found a related comment in the…
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Dear
I am trying to do allelic analysis Hic data getting same error G2 is mapping reads are zero and iced normalisation step getting error. I used bellow command to run analysis. non allelic analysi…
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Hi, the purpose of my analysis is to get the paternal specific kmer, and to increase the specificity of kmer I chosed 62mer to perform analysis, because 72mer would lead to an error of `meryl`.
At …
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### Description of the bug
I think the problem might be the format (using .list or .bed formats) that I used to use in intervals parameter and I do not know the correct format (even after reading the…
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Dear Dr. Zhou and colleagues:
**Can we use GEMMA to run a GWAS on UK Biobank data**?
I understand that I shall run each chromosome separately.
But still, if GEMMA only takes plink bed/bim/fam…
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Hi, I'm trying to do a n ANI Matrix usign this command line. but i have some problems.
I used this command line https://github.com/asadprodhan/Average-Nucleotide-Identity-ANI-analysis.git and I fol…
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### Operating System
Ubuntu 22.04
### Other Linux
_No response_
### Workflow Version
v1.4.0
### Workflow Execution
Command line (Cluster)
### Other workflow execution
_No response_
### EPI2M…
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# Taxa prioritization
For all genomes listed in VEuPathDb, NCBI Viruses and https://www.niaid.nih.gov/research/niaid-biodefense-pathogens generate a table (row per taxon) that summarized genome assem…