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fetch("https://genie-public-beta1.cbioportal.org/api/column-store/filtered-samples/fetch?", {
"headers": {
"accept": "*/*",
"accept-language": "en-US,en;q=0.9",
"cache-control": "no-cach…
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Hi,
Is it possibe to use CRIS tool for WES data?
All the best!
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Folks occasionally but consistently ask for this information on the forum and our current answer is that we provide these files as is. For the new GATK4 documentation, which we plan on releasing on Ja…
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We want to include genomics data in this workshop.
Pasting from #2 (@jorgepda )
I found this dataset from this [paper](http://science.sciencemag.org/content/347/6226/1138) and been running a co…
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Hi,
I'm encountering an issue while mapping some samples using STAR. The process begins normally and successfully maps the first sample, but then the subsequent samples are ignored. When I attempt to…
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I actually found out about Squash through the page at http://jdlm.info/articles/2017/05/01/compression-pareto-docker-gnuplot.html and realized that the genomics dataset that is used for those tests wo…
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Add 7316-1106 and 7316-3000 back to hope subcohort, except for proteomics. Use the attached file from Pei.
[master_11032023 (1).txt](https://github.com/user-attachments/files/15892642/master_11032023…
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Responsible: Tina V. @tinavisnovska
Date: Oct 17
Preview of the Data Carpentry Genomics lesson.
If you want to help with the workshop or be co-instructor, join us!
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Hi awesome project,
I have been playing with the tiledb-VCF library, and I am wondering if there are any design documents for bam and fastq files. Any chance people have been thinking about a data …
ghost updated
4 years ago