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In the CG IG we discovered an issue with the validation of slices. (Caused by tx.fhir.org not supporting all AL of LOINC https://github.com/HealthIntersections/fhirserver/issues/184).
To get a cle…
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**Describe the bug**
A. Since there are no files uploaded in raisinbread for the Genomic Browser, clicking on a file value is not possible. Therefore, the "viewGenomicFile" file view cannot be tested…
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Hi Claudio,
I just found that information is missing, so the samples are identified as RNA-seq experiments.
I am unsure what that is, but I will use this Issue to query additional information.
…
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https://doi.org/10.1101/131367 (http://biorxiv.org/content/early/2017/04/27/131367)
> Translating the vast data generated by genomic platforms into accurate predictions of clinical outcomes is a fu…
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```
curl 'http://localhost:8082/api/column-store/filtered-samples/fetch' -H 'accept: application/json, text/plain, */*' -H 'accept-language: en-US,en;q=0.9' -H 'cache-co…
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Dear Pynndescent team,
I am wondering whether there could be an option for this library to provide an API to allow external distance metric so that some unique distance metric can be used., e.g., f…
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**User story**
**Preferred solution**
- [ ] Implement for OME-Zarr, MuData-Zarr, and SpatialData-Zarr
- [ ] Implement for Genomic Profiles - see https://github.com/vitessce/vitessce/issues/1856…
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Hi,
I got this error
```
> nextflow run WarrenLab/minigraph-cactus-nf -profile lorencm --seqFile ../seqFile.txt --reference AU --binariesMode singularit
cactus-minigraph: error: unrecognized argum…
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I noticed some inconsistencies between public cBioPortal and MSK cBioPortal regarding structural variant data. I'm also not able to pull structural variant data anymore via the API endpoint for these …
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## The need
Create a matrix table for functional hits, such as from Pfam, across genomes
## The solution
A program similar to anvi-script-gen-hmm-hits-matrix-across-genomes, for for other data …