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Having a look at [this repository](https://github.com/kevinkovalchik/PyNetMHCpan) which is:
> A simple tool for using NetMHCpan and NetMHCIIpan using multiple CPUs in a Python environment.
- is it…
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When running the IEDB MHC I tool via the API, there are three dog alleles supported for NetMHCpan (ba and el): DLA-8803401, DLA-8850101, DLA-8850801. These alleles are not enabled in the IEDB MHC I st…
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I'm trying to install netMHCpan and netMHCIIpan but I'm with difficulties. In the terminal shows these output
1 protein sequences
/bin/sh: 1: netMHCpan: not found
netmhcpan not installed
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The internal boundaries of netmhcpan regarding peptide lengths are 8 - 56. NetMHCpan 4.1 always picks the most relevant Core of the peptide and does prediction on it. That is currently prohibited by t…
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Code:
```
28 def run_case(args):
29
30 id_, peptide = args
31
32 allele_type = "HLA-A*0201"
33
34 _log.debug(f"run case {allele_type} {peptide}")
35
36 target = …
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I'm trying to run MuPeXI pipeline with test data. There seems to be a problem with NetMHCpan, but I can't seem to fix it. I have checked the paths requested by the tool in its installation, as well as…
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Would it be possible to add NetH2pan as a supported epitope prediction algorithm? NetH2pan is a standard benchmark/tool for MHC class I binding affinity predictions in mice.
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Dear developer team,
Thank you very much for this great software. When I test it,this message appears:
Traceback (most recent call last):
File "D:\Software\MhcVizpipe-Pack\MhcVizPipe\python\lib…
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when request data from NetMHC,NetMHCIIpan,NetMHCcons,NetMHCpan, the program may stop of request error, but can recue when rerun, so is it convenient for you to add retry functions like https://github.…
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Thank you for developing this excellent tool!
I am also from Wuhan, China. Congratulatations on your remarkable achievements!
I encountered the following issue while following the tutorial for 'Ru…