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Hi, amazing repo!
Will icosahedral symmetric design (as mentioned in the preprint) also be made available on GitHub?
Thanks!
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Hi,
Thanks for releasing a fantastic package to the scientific community.
I just started testing with the example inputs to understand the input requirements and formats.
Here's my primary quest…
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@dauparas Thanks for you hard work. I think I found a bug. My command is:
`python run.py \`
--fixed_residues "A51 A52 A53 B154 B155 B156 C257 C258 C259 D360 D361 D362 E463 E464 E465 F566 F567 F568…
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Hi，in the part of ‘Generation of Symmetric Oligomers’，
I saw the command is:
"./scripts/run_inference.py --config-name symmetry inference.symmetry=tetrahedral 'contigmap.contigs=[360]' inference.o…
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Hello,
can someone confirm/deny that this term, as currently defined:
>Method allowing the detection of strong interactions between two
>molecules by their very close proximity or the overlap o…
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Hi team,
I am trying to refine a Modeller-generated structure of a membrane dimeric protein with bound ligand. Is it going to be possible with PREFMD2?
Just want to ask since I see some hashed …
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Hello, I am currently trying to analyse the clonotype information from a pooled BCR sample. Here the DNA barcodes were used to differentiate the sample of origins from a single captured 5' VDJ scRNA-s…
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I was wondering the location of fastq and fast5 for in-vitro oligomer ligation assay. I am trying to reproduce the Figure 6C from Workman et al. (2019) Nature Methods.
akk01 updated
3 years ago
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Hi, I was wondering if this implementation has the architecture to handle more than two chains: in the case that I would like to filter my binders against a oligomer target? I feel like it would be di…
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Thank you so much for the release of your code =D
I'm trying to model a C12 oligomer of one of my protein and I followed your procedure to install oligomer_hallucination.
I got some issues with…