nanopore-wgs-consortium NA12878 issues

nanopore-wgs-consortium / NA12878

Data and analysis for NA12878 genome on nanopore

Other

372 stars 93 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

Any plans for releasing ONT Duplex data?

#119 PengNi opened 4 months ago
0
where should i find events in rel6？

#118 leeyaxi opened 1 year ago
0
Difficulties in finding NA12878 ONT data

#117 weishwu closed 1 year ago
2
high quality SV callset

#116 asmo2a opened 1 year ago
0
Bump pillow from 5.3.0 to 9.3.0 in /nanopore-human-transcriptome/scripts/bulk_signal_read_correction

#115 dependabot[bot] opened 1 year ago
0
Deuplicate read IDs in RNA dataset: Bham2_Run

#114 hasindu2008 opened 1 year ago
2
Basecalls on latest super accuracy models

#113 hasindu2008 closed 1 year ago
4
Bump numpy from 1.15.4 to 1.22.0 in /nanopore-human-transcriptome/scripts/bulk_signal_read_correction

#112 dependabot[bot] opened 2 years ago
0
Format of FAST5 files in rel6

#111 MaxNacemit closed 2 years ago
1
Bump pillow from 5.3.0 to 9.0.1 in /nanopore-human-transcriptome/scripts/bulk_signal_read_correction

#110 dependabot[bot] closed 1 year ago
1
Bump pillow from 5.3.0 to 9.0.0 in /nanopore-human-transcriptome/scripts/bulk_signal_read_correction

#109 dependabot[bot] closed 2 years ago
1
Variants in High Confidence VCF and FASTQ Output have 0 intersection

#108 hkarakurt closed 2 years ago
0
ultra long reads

#107 jo-mc closed 2 years ago
1
Bump pillow from 5.3.0 to 8.3.2 in /nanopore-human-transcriptome/scripts/bulk_signal_read_correction

#106 dependabot[bot] closed 2 years ago
1
Cannot Download Samples of Rel6 DNA Data

#105 hkarakurt8742 closed 2 years ago
1
rel7 release

#104 mitenjain closed 2 years ago
0
Bump pillow from 5.3.0 to 8.2.0 in /nanopore-human-transcriptome/scripts/bulk_signal_read_correction

#103 dependabot[bot] closed 2 years ago
1
Bump pyyaml from 3.13 to 5.4 in /nanopore-human-transcriptome/scripts/bulk_signal_read_correction

#102 dependabot[bot] opened 3 years ago
0
Bump jinja2 from 2.10 to 2.11.3 in /nanopore-human-transcriptome/scripts/bulk_signal_read_correction

#101 dependabot[bot] opened 3 years ago
0
Bump pillow from 5.3.0 to 8.1.1 in /nanopore-human-transcriptome/scripts/bulk_signal_read_correction

#100 dependabot[bot] closed 3 years ago
1
why are there two bulk fast5 files for direct Notts RNA run2 ?

#99 Huanle closed 3 years ago
1
Where is CHR22?

#98 drdivine closed 3 years ago
2
rel2 fixed

#97 mitenjain closed 3 years ago
0
Nucleotide symbol "U" rather than "T" found in cDNA

#96 zhenLiuXplr closed 3 years ago
2
Adding telomere writeup from the 2018 paper

#95 mitenjain closed 3 years ago
0
rel6 version

#94 PanZiwei closed 4 years ago
1
Duplicate reads in Native RNA fastq file

#93 tleonardi closed 3 years ago
5
Sequencing data for in-vitro oligomer ligation assay (Figure 6C)

#92 akk01 opened 4 years ago
1
IVT Sequence for EEF2

#91 akk01 closed 4 years ago
0
TE/CDS annotation gff

#90 weedcentipede closed 2 years ago
1
Adding flair, m6A, and polyA analyses from the NMeth paper

#89 mitenjain closed 4 years ago
0
number of reads in summary and fastq files do not match

#88 vkkodali closed 2 years ago
2
cDNA reads aligning poorly

#87 vkkodali opened 4 years ago
1
ONT Sequencing data for Figure 6b and 6c

#86 akesarwani opened 4 years ago
2
GENCODE-sensitive dataset

#85 akesarwani opened 4 years ago
2
Summary file for cDNA data

#84 vkkodali closed 4 years ago
3
rel2

#83 mitenjain closed 4 years ago
2
FAST5 files for cDNA reads

#82 SaberHQ opened 4 years ago
3
FastQ quality

#81 ymatsumoto opened 4 years ago
0
Fixed the fast5 links for the flow cells FAB45321

#80 hasindu2008 closed 4 years ago
0
Broken Fast5 links for the flow cells FAB45321**

#79 hasindu2008 closed 4 years ago
1
Fixed the broken link for FASTQ tar for FAB42205

#78 hasindu2008 closed 4 years ago
0
Number of flow cells used for the ultra-long prep

#77 smf96 opened 4 years ago
0
Bump pyyaml from 3.13 to 5.1 in /nanopore-human-transcriptome/scripts/bulk_signal_read_correction

#76 dependabot[bot] closed 3 years ago
1
Bump pillow from 5.3.0 to 6.2.0 in /nanopore-human-transcriptome/scripts/bulk_signal_read_correction

#75 dependabot[bot] closed 3 years ago
1
Example file for nvrna.180828.180927.read.isoform.map.nodup.txt

#74 DafniG opened 4 years ago
0
rel6 : individual FASTQ links are broken

#73 AlexanderVi opened 4 years ago
2
Individual FAST5 links for rel6 seem to be broken

#72 pjedge closed 4 years ago
3
minimap2 version(s)?

#71 baraaorabi opened 4 years ago
0
Is the raw data(signal data) of rel6 the same as rel3, rel4?

#70 huangnengCSU closed 4 years ago
1