-
May I ask if it is possible to develop a version of GPTCelltype that supports Scanpy?"
-
Legacy tutorial we use in the single-cell workbench currently
https://scanpy.readthedocs.io/en/stable/tutorials/basics/clustering-2017.html
New tutorial to consider
https://scanpy.readthedocs.io/…
-
I installed omicverse on the HPC with pip, followed the suggestion mentioned on #60
and when import omicverse, i met errors:
```
Traceback (most recent call last):
File "py_test.py", line 17, i…
-
{
"platform":"",
"hub-mirror": [
"若对OS/ARCH无要求,platform请留空,不要加任何值,默认就是linux/amd64",
"如需切换arm架构,请修改platform为arm64或linux/arm64/v8",
"格式:你需要转换的原始镜像$自定义镜像名:自定义标签名 (其中 …
-
When we redesign the single-cell workbench page, I think it would be a great time to update the scanpy and anndata packages. I made a branch "scanpy-1.9.8-upgrade" where I will install the latest ver…
-
Scanpy now features a cut down version of the basic plotting tutorial hosted here, which shows all the steps that only rely on scanpy.
https://scanpy.readthedocs.io/en/stable/tutorials/basics/clust…
-
[semla] is one of the most excellent work that I have ever seen, and I have a question for you.
As we all known, tissue_positions.csv (produced by spaceranger >=2.0) have colnames for postion in the …
-
Hello! nice tool. Any plans to make it compatible with scanpy?
-
I used to use scanpy python package for down-stream analysis.
I wonder how the predicted gene expressions can be analyzed in Anndata (Scanpy).
-
**Is your feature request related to a problem? Please describe.**
I wish I could use rapids-singlecell to map labels and embeddings from reference data to new data
**Describe the solution you'd l…