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Review articles with lists:
* https://www.sciencedirect.com/science/article/pii/S0002929721000951?via%3Dihub
* https://www.nature.com/articles/s41580-021-00382-6
Websites with lists:
* TR-gnomAD's li…
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Hi,
Thank you for developing the excellent `TRGT` tool. I've read your paper "_Resolving the unsolved: Comprehensive assessment of tandem repeats at scale_". To gain a better understanding, I've als…
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I am failing to detect a long tandem expansion expansion in STR region.
All other tandem repeat expansions are detected as expected but they are much shorter and covered by at least some spanning…
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Dear @readmanchiu,
The [Variant Call Format Specification v4.4. and v4.5](https://samtools.github.io/hts-specs/VCFv4.5.pdf) were released recently. One of the major changes is support for (short) t…
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There is a recurrent rearrangement found in all my calls for the DUX4 unknown partner. Is this a known false positive or am I misunderstanding something? Has this been found before?
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**MIBiG ID**
BGC0000627
**Short summary**
Add publication
**Literature references**
"Tandem repeats in precursor protein stabilize transcript levels and production levels of the fungal riboso…
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Hi there,
I am interested in this amazing tool. I am wondering whether there are any limitations regarding the length of each tandem repeat. Specifically, I would like to detect a 67-bp tandem repe…
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Basically I have a somewhat plausible long read assembly with several tandem repeats. When feeding it to Unicycler w/ `--existing_long_read_assembly` together w/ Illumina short reads, the assembly get…
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Dear Mr/Mrs,
I am trying to combine data from two PacBio runs: DNA (10kb) + cDNA (10kb), these regions overlap each other partially and I would like to phase them based on short-tandem repeats and …
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Hi!
I was just wondering if there is any allele counts data coming out for FGF14 ~ (hg38 - chr13:102161576-102161726) for autosomal dominant late-onset spinocerebellar ataxia-27B (SCA27B) in v4 (s…