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Dear Authors,
I hope this email finds you well. I would like to express my sincere gratitude to your team for developing the tool that has been of great assistance to me.
Currently, I'm facing an is…
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Hello,
I'm working with a single cell dataset, which has imperfect cell isolation, and has some mis-labeling of counts between cells. We can estimate the level of "contamination" for each cell, for…
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Hello DeepTalk team,
You developed a good tool. I am reaching out as I am currently faced with a problem when attempting to analyze my own 10x Visium X2 (H&E image) data using DeepTalk, following t…
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Use the wordcloud python library to generate a word cloud from this (source: Modified from I2K Program):
```
BioImage-Analysis Code Generation
Introduction to CellProfiler: A beginner’s guide to …
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I would like to ask how Trust4 can directly analyze paired-end .fastq format data from the 10X Genomics platform for single-cell analysis, instead of analyzing BAM format data. Can you provide support…
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Application: Cell Ranger ARC
Link: https://www.10xgenomics.com/support/software/cell-ranger-arc/latest
Cluster: Myriad
Description: Cell Ranger ARC is an advanced analytical suite designed f…
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### Project short name:
CellInteractionsHNSCC
### Primary Wrangler:
Ida
### Secondary Wrangler:
### Associated files
* Google Drive: [folder](https://drive.google.com/drive/folders/1…
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Hello. I am trying to apply MultiK to figure out optimal clustering number for single-cell RNA sequencing (about 40,000 ten thousands cells )
Although i run the code with narrow resolution interval, …
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Hi
I was reading the paraCell paper and I see that you have a nice collection of single cell datasets. I was wondering if it is possible to download these h5ad files with all the annotations and an…