-
-
I propose a new UBKG model to address three separate requests.
# Requests
1. The UBKG should be the source of truth for the assay metadata currently managed in the value object of the soft assay t…
-
Hi all,
I observed a very misleading behaviour with the color scale : the default color scheme is different from one plot to another, which is extremely misleading.
```
h5path = '/home/user/D…
-
Hi, I'm trying to use scGPT for multiomics studies using Single Cell Multiome ATAC + Gene Expression as database for training.
Could you provide a tutorial on how to use scGPT for use in a multiomi…
-
Hi developers,
Nice method and code/documentation! I was wondering how feasible is to apply ANANSE to single-cell multiomics data (RNA+ATAC):
- For scalability, should I pseudobulk cells by cell…
-
We expect some Tapestri data. We'll first need to determine whether this means:
- Reuse of an existing sequencing template with no changes, maybe just re-branding/making it available also under the…
-
Hi,
SCENIC+ is a very useful software that has brought new insights to my research.
I downloaded the unpublished version of SCENIC+ around January 2023, but then the hard disk of our laboratory …
AIBio updated
4 weeks ago
-
As a TL I would to check the report consistency, identify and flag inconsistencies so that we can improve confidence in the report.
**Acceptance Criteria**
- [ ] Identify report rows where the m…
-
I want to integrate my paired RNA data and Protein data as the tutorial described, but encountered an error when I'm going to get the latent space representation after training. The message is
```…
-
**Describe the bug**
```
Error executing process > 'single_sample_scrublet:SCRUBLET__DOUBLET_REMOVAL:SC__SCRUBLET__DOUBLET_DETECTION_REPORT (1)' …