gf-dcc data-model issues

gf-dcc / data-model

Gray Foundation data model

https://gf-dcc.github.io/data-model/

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issues

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Update post-create.sh

#98 anngvu closed 1 month ago
0
Make assay/experiment parameters optional that will added once at the dataset level

#97 anngvu opened 3 months ago
0
Add DNAsequencing template

#96 cconrad8 opened 3 months ago
0
Workflow to create PR to update docs data model page

#95 anngvu opened 4 months ago
0
Update supersample.json

#94 anngvu closed 4 months ago
0
Update sample tracking schema UI with ids

#93 anngvu closed 4 months ago
0
Add registered-json schemas here and update to include patient/sample ids

#92 anngvu closed 4 months ago
0
Patch/classbrca

#91 cconrad8 closed 4 months ago
1
Patch/followup 89

#90 anngvu closed 5 months ago
1
Patch/clin data updates concept 2

#89 anngvu closed 5 months ago
4
Update TBD descriptions for current user-facing clinical fields

#88 anngvu closed 4 months ago
0
Cohort clinical data updates

#87 anngvu closed 5 months ago
2
Add TypeContraceptiveUse

#86 anngvu closed 5 months ago
1
Add SurgeryReason to Cohort Core

#85 anngvu closed 5 months ago
0
Feat/examples

#84 anngvu closed 5 months ago
0
Update age validation

#83 anngvu closed 6 months ago
2
Update age to allow blanks

#82 cconrad8 opened 6 months ago
1
imaging level 2 channels inheriting imaging level 2

#81 cconrad8 opened 7 months ago
0
Feat/bulk methylation templates

#80 anngvu closed 7 months ago
1
Add the dca-template-config.json to this repo and use for testing

#79 anngvu closed 7 months ago
0
Add mappings to ontologies

#78 cconrad8 opened 7 months ago
0
Create biospecimen manifest for biobank

#77 cconrad8 opened 8 months ago
0
Patch/issue 75

#76 anngvu closed 8 months ago
1
CohortCoreTemplate contains extra terms

#75 cconrad8 closed 8 months ago
0
Update platforms and other tidying

#74 anngvu closed 9 months ago
1
Update more seq parameters

#73 anngvu closed 9 months ago
1
Patch/seq params

#72 anngvu closed 10 months ago
1
Add I1 as valid enum value for Read Indicator

#71 anngvu closed 10 months ago
0
Feat/extend creds setup

#70 anngvu closed 10 months ago
0
Patch/getting started

#69 anngvu closed 10 months ago
0
Implement analysis helpers for data model

#68 anngvu opened 10 months ago
0
Import bisulfite-sequencing template (level 2/3)

#67 anngvu closed 7 months ago
0
Close #43

#66 anngvu closed 10 months ago
1
Add scripts and docs for maintainers

#65 anngvu closed 4 months ago
3
Patch/scripts

#64 anngvu closed 10 months ago
0
Update devcontainer with v23.9.1

#63 anngvu closed 10 months ago
0
Feat/linkml-ify

#62 anngvu closed 10 months ago
1
Better alignment with MITI standards

#61 anngvu opened 11 months ago
1
Patch/upgrade schematic

#60 anngvu closed 11 months ago
0
Upgrade schematic to v23.7.1

#59 anngvu closed 11 months ago
1
Issues #42 and (partially) #22 #50

#58 anngvu closed 12 months ago
1
Close #49

#57 anngvu closed 12 months ago
0
Patch/dispatch

#56 anngvu closed 12 months ago
0
Import processed scATAC-seq templates

#55 anngvu opened 12 months ago
0
Patch/clean

#54 anngvu closed 12 months ago
0
More streamlining of patient and biospecimen modules

#53 anngvu closed 12 months ago
0
Move some elements from Patient/Diagnosis to Biospecimen/Characteristics

#52 anngvu closed 12 months ago
0
Patch/reduce exposure

#51 anngvu closed 12 months ago
0
Add something like `DetailedSampleID` to all sequencing file templates

#50 anngvu opened 12 months ago
0
Add HEIC file format

#49 anngvu closed 12 months ago
0